update myst-nb

3 files changed, 23 insertions, 144 deletions

diff --git a/docs/index.md b/docs/index.md
index a362a10e..371b917c 100644
--- a/docs/index.md
+++ b/docs/index.md
@@ -22,6 +22,10 @@ tutorial.md
 notebooks/examples/dataset.ipynb
 ```
 
+```{admonition} Launch notebooks in MyBinder
+Each of the notebooks can be launched interactively in MyBinder by clicking on 🚀 icon (top-right corner).
+```
+
 ```{toctree}
 :maxdepth: 2
 :caption: GitHub artifacts
diff --git a/requirements/dev_requirements.in b/requirements/dev_requirements.in
index baed56a5..635c62d1 100644
--- a/requirements/dev_requirements.in
+++ b/requirements/dev_requirements.in
@@ -12,5 +12,5 @@ flake8
 pre-commit
 pip-tools
 sphinx
-myst-nb
+myst-nb>=0.14
 sphinx-book-theme
\ No newline at end of file
diff --git a/requirements/dev_requirements.txt b/requirements/dev_requirements.txt
index 9c652d29..125c77e5 100644
--- a/requirements/dev_requirements.txt
+++ b/requirements/dev_requirements.txt
@@ -1,17 +1,9 @@
 alabaster==0.7.12
     # via sphinx
-anyio==3.5.0
-    # via jupyter-server
 appnope==0.1.3
     # via
     #   ipykernel
     #   ipython
-argon2-cffi==21.3.0
-    # via
-    #   jupyter-server
-    #   notebook
-argon2-cffi-bindings==21.2.0
-    # via argon2-cffi
 asttokens==2.0.5
     # via stack-data
 attrs==21.4.0
@@ -25,17 +17,11 @@ babel==2.10.1
 backcall==0.2.0
     # via ipython
 beautifulsoup4==4.11.1
-    # via
-    #   nbconvert
-    #   pydata-sphinx-theme
+    # via pydata-sphinx-theme
 black==22.3.0
     # via -r dev_requirements.in
-bleach==5.0.0
-    # via nbconvert
 certifi==2021.10.8
     # via requests
-cffi==1.15.0
-    # via argon2-cffi-bindings
 cfgv==3.3.1
     # via pre-commit
 charset-normalizer==2.0.12
@@ -43,17 +29,14 @@ charset-normalizer==2.0.12
 click==8.1.2
     # via
     #   black
+    #   jupyter-cache
     #   pip-tools
-colorama==0.4.4
-    # via nbdime
 coverage[toml]==6.3.2
     # via pytest-cov
 debugpy==1.6.0
     # via ipykernel
 decorator==5.1.1
     # via ipython
-defusedxml==0.7.1
-    # via nbconvert
 distlib==0.3.4
     # via virtualenv
 docutils==0.17.1
@@ -64,9 +47,7 @@ docutils==0.17.1
     #   sphinx
     #   sphinx-togglebutton
 entrypoints==0.4
-    # via
-    #   jupyter-client
-    #   nbconvert
+    # via jupyter-client
 executing==0.8.3
     # via stack-data
 fastjsonschema==2.15.3
@@ -75,10 +56,6 @@ filelock==3.6.0
     # via virtualenv
 flake8==4.0.1
     # via -r dev_requirements.in
-gitdb==4.0.9
-    # via gitpython
-gitpython==3.1.27
-    # via nbdime
 gprof2dot==2021.2.21
     # via pytest-profiling
 greenlet==1.1.2
@@ -86,13 +63,12 @@ greenlet==1.1.2
 identify==2.4.12
     # via pre-commit
 idna==3.3
-    # via
-    #   anyio
-    #   requests
+    # via requests
 imagesize==1.3.0
     # via sphinx
 importlib-metadata==4.11.3
     # via
+    #   jupyter-cache
     #   myst-nb
     #   sphinx
 importlib-resources==5.7.1
@@ -100,22 +76,10 @@ importlib-resources==5.7.1
 iniconfig==1.1.1
     # via pytest
 ipykernel==6.13.0
-    # via
-    #   ipywidgets
-    #   notebook
+    # via myst-nb
 ipython==8.2.0
     # via
     #   ipykernel
-    #   ipywidgets
-    #   jupyter-sphinx
-    #   myst-nb
-ipython-genutils==0.2.0
-    # via
-    #   ipywidgets
-    #   notebook
-ipywidgets==7.7.0
-    # via
-    #   jupyter-sphinx
     #   myst-nb
 isort==5.10.1
     # via -r dev_requirements.in
@@ -123,114 +87,66 @@ jedi==0.18.1
     # via ipython
 jinja2==3.1.1
     # via
-    #   jupyter-server
     #   myst-parser
-    #   nbconvert
-    #   nbdime
-    #   notebook
     #   sphinx
 jsonschema==4.4.0
     # via nbformat
-jupyter-cache==0.4.3
+jupyter-cache==0.5.0
     # via myst-nb
 jupyter-client==7.2.2
     # via
     #   ipykernel
-    #   jupyter-server
     #   nbclient
-    #   notebook
 jupyter-core==4.10.0
     # via
     #   jupyter-client
-    #   jupyter-server
-    #   nbconvert
     #   nbformat
-    #   notebook
-jupyter-server==1.16.0
-    # via
-    #   jupyter-server-mathjax
-    #   nbdime
-jupyter-server-mathjax==0.2.5
-    # via nbdime
-jupyter-sphinx==0.3.2
-    # via myst-nb
-jupyterlab-pygments==0.2.2
-    # via nbconvert
-jupyterlab-widgets==1.1.0
-    # via ipywidgets
 markdown-it-py==1.1.0
     # via
     #   mdit-py-plugins
     #   myst-parser
 markupsafe==2.1.1
-    # via
-    #   jinja2
-    #   nbconvert
+    # via jinja2
 matplotlib-inline==0.1.3
     # via
     #   ipykernel
     #   ipython
 mccabe==0.6.1
     # via flake8
-mdit-py-plugins==0.2.8
+mdit-py-plugins==0.3.0
     # via myst-parser
 memory-profiler==0.60.0
     # via pytest-monitor
-mistune==0.8.4
-    # via nbconvert
 mypy==0.942
     # via -r dev_requirements.in
 mypy-extensions==0.4.3
     # via
     #   black
     #   mypy
-myst-nb==0.13.2
+myst-nb==0.14.0
     # via -r dev_requirements.in
-myst-parser==0.15.2
+myst-parser==0.17.2
     # via myst-nb
 nbclient==0.5.13
-    # via
-    #   jupyter-cache
-    #   nbconvert
-nbconvert==6.5.0
-    # via
-    #   jupyter-server
-    #   jupyter-sphinx
-    #   myst-nb
-    #   notebook
-nbdime==3.1.1
     # via jupyter-cache
 nbformat==5.3.0
     # via
-    #   ipywidgets
     #   jupyter-cache
-    #   jupyter-server
-    #   jupyter-sphinx
     #   myst-nb
     #   nbclient
-    #   nbconvert
-    #   nbdime
-    #   notebook
 nest-asyncio==1.5.5
     # via
     #   ipykernel
     #   jupyter-client
     #   nbclient
-    #   notebook
 nodeenv==1.6.0
     # via pre-commit
-notebook==6.4.11
-    # via widgetsnbextension
 packaging==21.3
     # via
     #   ipykernel
-    #   jupyter-server
-    #   nbconvert
     #   pydata-sphinx-theme
     #   pytest
     #   sphinx
-pandocfilters==1.5.0
-    # via nbconvert
 parso==0.8.3
     # via jedi
 pathspec==0.9.0
@@ -251,10 +167,6 @@ pluggy==1.0.0
     # via pytest
 pre-commit==2.18.1
     # via -r dev_requirements.in
-prometheus-client==0.14.1
-    # via
-    #   jupyter-server
-    #   notebook
 prompt-toolkit==3.0.29
     # via ipython
 psutil==5.9.0
@@ -263,17 +175,13 @@ psutil==5.9.0
     #   memory-profiler
     #   pytest-monitor
 ptyprocess==0.7.0
-    # via
-    #   pexpect
-    #   terminado
+    # via pexpect
 pure-eval==0.2.2
     # via stack-data
 py==1.11.0
     # via pytest
 pycodestyle==2.8.0
     # via flake8
-pycparser==2.21
-    # via cffi
 pydata-sphinx-theme==0.8.1
     # via sphinx-book-theme
 pyflakes==2.4.0
@@ -281,8 +189,6 @@ pyflakes==2.4.0
 pygments==2.12.0
     # via
     #   ipython
-    #   nbconvert
-    #   nbdime
     #   sphinx
 pyparsing==3.0.7
     # via packaging
@@ -306,35 +212,23 @@ pytz==2022.1
     # via babel
 pyyaml==6.0
     # via
+    #   jupyter-cache
     #   myst-nb
     #   myst-parser
     #   pre-commit
     #   sphinx-book-theme
 pyzmq==22.3.0
-    # via
-    #   jupyter-client
-    #   jupyter-server
-    #   notebook
+    # via jupyter-client
 requests==2.27.1
     # via
-    #   nbdime
     #   pytest-monitor
     #   sphinx
-send2trash==1.8.0
-    # via
-    #   jupyter-server
-    #   notebook
 six==1.16.0
     # via
     #   asttokens
-    #   bleach
     #   pytest-profiling
     #   python-dateutil
     #   virtualenv
-smmap==5.0.0
-    # via gitdb
-sniffio==1.2.0
-    # via anyio
 snowballstemmer==2.2.0
     # via sphinx
 soupsieve==2.3.2.post1
@@ -342,7 +236,6 @@ soupsieve==2.3.2.post1
 sphinx==4.5.0
     # via
     #   -r dev_requirements.in
-    #   jupyter-sphinx
     #   myst-nb
     #   myst-parser
     #   pydata-sphinx-theme
@@ -368,12 +261,8 @@ sqlalchemy==1.4.35
     # via jupyter-cache
 stack-data==0.2.0
     # via ipython
-terminado==0.13.3
-    # via
-    #   jupyter-server
-    #   notebook
-tinycss2==1.1.1
-    # via nbconvert
+tabulate==0.8.9
+    # via jupyter-cache
 toml==0.10.2
     # via pre-commit
 tomli==2.0.1
@@ -387,23 +276,15 @@ tornado==6.1
     # via
     #   ipykernel
     #   jupyter-client
-    #   jupyter-server
-    #   nbdime
-    #   notebook
-    #   terminado
 traitlets==5.1.1
     # via
     #   ipykernel
     #   ipython
-    #   ipywidgets
     #   jupyter-client
     #   jupyter-core
-    #   jupyter-server
     #   matplotlib-inline
     #   nbclient
-    #   nbconvert
     #   nbformat
-    #   notebook
 types-python-dateutil==2.8.10
     # via -r dev_requirements.in
 types-pyyaml==6.0.5
@@ -416,25 +297,19 @@ typing-extensions==4.1.1
     # via
     #   black
     #   mypy
+    #   myst-nb
+    #   myst-parser
 urllib3==1.26.9
     # via requests
 virtualenv==20.14.0
     # via pre-commit
 wcwidth==0.2.5
     # via prompt-toolkit
-webencodings==0.5.1
-    # via
-    #   bleach
-    #   tinycss2
-websocket-client==1.3.2
-    # via jupyter-server
 wheel==0.37.1
     # via
     #   pip-tools
     #   pytest-monitor
     #   sphinx-togglebutton
-widgetsnbextension==3.6.0
-    # via ipywidgets
 zipp==3.8.0
     # via
     #   importlib-metadata